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Phenotypic data from the full 63 RIL mapping population were analyzed in pairwise marker regression tests using the marker umc2145 as a proxy for sol and each marker in the chromosome 7 segment.
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Subsets of individuals with mean training and testing set sizes of 787 and 87 individuals, respectively, were used to perform marker regressions and test prediction accuracy four different ways: BG1 (or BG2) – within-breeding group CV simulates a situation where related individuals have already been phenotyped on both (or similar) sites, as BG members were distributed across sites.
In order to deal with potential problems raised by multiple testing in single marker regression, the p-value for individual testing was set to 1.316×10−5 to obtain a 0.05 genome-wide type I error rate using the Šidák's correction.
This module allows calculating corrected single-marker regression F-test values after detecting and removing outlier data in each marker genotypic class.
Have plenty of unit tests, move towards BDD, and automate integration and regression tests.
When you're releasing code multiple times a day, you don't have time for full regression tests.
single marker regression.
Marissa Mayer: We actually did, you know, regression tests on what was the best predictor of performance?
ProdPerfect wants to make quality assurance regression tests for web applications easier and more effective.
Interval mapping improves on the marker regression method by estimating markers (pseudomarkers) in between true markers.
However, GRK2 expression was not identified as an independent prognostic marker in multivariate Cox regression test, although close to the statistical significance.
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