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Marker mining obtained an average of 387 SNP markers and 87 InDel markers for each of the 24 genome sequence assembly scaffolds bearing markers linked to 11 genes of agronomic interest.
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Of the 590 DNA markers obtained from marker mining from scaffold87443, a staggering 243 markers showed a diagnostic nature in the 10 sequenced cultivars, which illustrates the effectiveness of this marker development strategy.
A further 243 candidate diagnostic markers were discovered by marker mining on a scaffold bearing non-diagnostic markers linked to the PhtjR gene.
Scaffold84773 was used as a test case to investigate the feasibility of developing diagnostic markers by marker mining on genome sequencing assembly scaffolds.
A marker-free hLF BAC vector containing the entire hLF genomic sequence without an antibiotic resistance marker was obtained in our previous study, which contains the procedural details17.
To develop universal markers, all the obtained markers were examined in 16 analysed species by electronic amplification.
Marker mining through scaffold sequence alignments obtained, on average, 378 SNP markers and 87 InDel markers for each of 23 scaffolds bearing markers linked to lupin genes of breeder interest.
Open-pit mining, surface mining to obtain minerals other than coal.
Step 2: Spend most of the morning decorating it with Sharpie and/or Expo markers also obtained from the supply closest.
MW markers were obtained from Bio-Rad.
In many of these studies, some markers are also obtained repeatedly during the study period.
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