Exact(8)
Actually, all these 4 tag SNPs were included in our analyzed marker list.
In addition, we typed 66 markers localised near candidate genes selected from studies of severe malaria (marker list available on request).
Our results provide a comprehensive classification of more than 280 genes from our primary HVC marker list that are related to a wide variety of genetic, biochemical and cellular functions as presented in Tables 2 7.
The summary organizes meaningful results via a Venn diagram, a table, and a marker list.
The relative score each marker has determines its priority in the marker list.
Physical map coordinates for markers (CB position, contig ID) were obtained directly from FPC by right-clicking 'file' and selecting 'save ordered marker list'.
Similar(51)
The 75 known associated markers were defined by including, for each MS-associated marker listed in the National Human Genome Research Institute NHGRI GWASAS catalog (http://genome.gov/gwastudies/), a single best tag at r > 0.4 from the set of 360,557 markers if available.
This algorithm is implemented as a MySQL aggregate function and performs genomic region and gene assignments for collections of SNPs, such as GWAS SNP marker lists, using locally stored LD information from the International HapMap Project.
Differentiation markers (list generated by an automatic analysis of the bibliography and displayed as supplementary material File S1) were selected for analysis and clustered based on gene expression (Figure 5B).
a Full markers list is provided in Additional file 6.
According to the mass spectrum markers and gene expression markers list, the candidate biomarkers for OS were identified by comparative analysis.
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