Sentence examples for marker interval compared from inspiring English sources
The root-mean-squared error between the linkage maps and the DAGGER map was 0.82 cM per marker interval compared to 2.28 cM for the existing consensus map.
The DAGGER map had consistently less error, with an average of 0.82 cM per marker interval compared to 2.28 cM with MergeMap.
The RMS error between the linkage maps and the DAGGER map was 0.82 cM per marker interval compared to 2.28 cM for the existing consensus map.
When marker intervals were compared between two maps, some discrepancies were detected between genetic distance and physical distance.
Genetic lengths of the whole genome, chromosomes and adjacent marker intervals are compared with those of Rutgers Map v.2, which was constructed based on Caucasian populations (Centre d'Etudes du Polymorphisme Humain (CEPH) and Icelandic families) by mapping methods identical to those of the GENDISCAN map, CRIMAP software and the Kosambi map function.
All of the mapped markers were arranged in the same order and with similar genetic intervals compared with previous studies.
The NM linkage group 7 had the largest marker interval, lowest marker density and, compared with the CM334 chromosome 7, had the smallest fraction of unigene markers per gene (Kim et al. 2014).
Individual maps across studies were compared based on their correlation coefficients for marker interval distance and for marker order based on their longest common subsequence (LCS) using the qualV package (Jachner et al. 2007).
As a consequence, the average marker interval in the D. pulex linkage map is only 7 cM, as compared to rather larger 15 cM in the D. magna linkage map.
Expected heterozygosity calculated for the two adjacent marker loci around each marker interval as an average (Hexp_AVG) resulted in systematically lower values with a smaller range compared to GD_IBD (0.05 to 0.50, average of 0.36).
The B genome (B1 B8) contained the remaining 37% of the markers with a marker density of 0.24 at an average marker interval of 4.7 cM, indicating that there is less polymorphism in the B genome as compared to the A genome in the intronic regions.
