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In this study, no differences were identified in the OsWOX3B gene sequences of pubescent rice and glabrous Yunnan Nuda rice, which would provide an advantageous functional molecular marker for breeding purposes.
In addition, a SNP marker was found which co-segregated with the leaf morphology genotypes and phenotype, which could be used as a molecular marker for breeding purposes.
Association analysis performed in the RS × S experimental progeny and over a population derived from several other seedless × seedless crosses revealed p3_VvAGL11 as the most reliable marker for breeding purposes over three different seasons and across different genetic backgrounds.
The average RSC of cultivars possessing the SNP allele A 2746 was clearly lower than the average of cultivars lacking this allele throughout cold storage, which makes this SNP an attractive marker for breeding applications.
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The upregulated genes can be used as transgenes and/or functional markers for breeding aflatoxin-resistant cottonseed.
Owing to their polymorphic nature and frequent associations with genes, SSRs have an advantage to be used as genetic markers for breeding as well as for intraspecific mapping populations for functional studies (Kim et al. 2008).
Since SNPs can be relevant in terms of biochemical function of protein and gene regulation, nucleotide substitutions themselves could be causal of particular traits and thus be markers for breeding (Anderssen and Lübberstedt 2003; Gupta and Rustgi 2004).
The fine mapping of the QTL induced by African Xoo MAI1 and BAI4 on chromosome 7 which controlled 37%% of phenotypic variance as well as the one induced on chromosome 11 by all African Xoo tested is ongoing and will provide news markers for breeding program.
Microsatellite markers of Jasminum sambac (Oleaceae) were isolated to investigate wild germplasm resources and provide markers for breeding.
These SFPs can be used as markers for breeding purposes, or they can be converted to conventional markers by sequencing.
Genomic selection refers to the use of genomewide dense markers for breeding value estimation and subsequently for selection.
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