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As several QTLs were detected around previously cloned gene loci, we performed marker analysis for the genes GW2, GS3, qSW5/GW5, and GW8.
The four-stage approach had an extra step of marker analysis for the rest of the carrier chromosome following the recovery of a double recombinant [7].
The AIM-SNP 34plex assay was run in duplicate with fully concordant results and enough DNA extract remained to perform Y-chromosome SNP marker analysis for five of the six male samples.
Despite these remarkable achievements, clinicians still rely on traditional tumor marker analysis for treatment decisions.
MM performed all of the molecular marker analysis for common bean and analyzed the initial syntenty between the two species.
The additional families will be used for confirmation of QTL effects and, when combined with high-density marker analysis, for fine mapping of confirmed QTL.
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In theory, it is similar to single-marker analysis for main-effect QTL and two-marker analysis for epistatic QTL, and the difference is that the GWAS requires the setting of a significance threshold at the genome-wide level.
The seven markers derived from the RCT pathway were then merged with other markers previously reported by Jiang et al. [24] and combined into a multiple-marker analysis for each trait in attempt to further improve understanding of genetic regulation of fat deposition, fatty acid composition and body growth phenotypes.
Single-marker analysis for tendency to undergo tetrasomic recombination (number of null PCR markers per genotype) indicated significant marker associations on LGA02 and LGA07.
For quantitative traits, we performed the Kruskal-Wallis test and analysis of variance (ANOVA) for single marker analysis and for haplotypes by using haplotype trend regression (HTR) [ 14].
The QTL detected by composite interval mapping in the subpopulation were corroborated by single marker analysis (SMA) for data from the full population of ~480 F2 plants.
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