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The statistical maps were masked on SPM8 templateatemplate
Group results maps were masked with a manually-defined EC ROI.
To ensure that only differences in activation were analysed, the difference maps were masked with the main effect of condition.
Individual statistical parametric maps were masked by a visual cortex mask obtained with a retinotopic mapping rotating-wedge stimulus versus baseline contrast (see details on the localizer below).
To allow us to specifically focus on topographic shifts in body-part representation, individual maps were masked by FreeSurfer's pre- and postcentral gyrus labels.
Gray matter probability maps were masked (i.e., nonbrain voxels set to zero) and smoothed to yield images with similar smoothness to the corresponding functional data, to minimize partial volume effects (21).
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BAC end sequences (BES) in this physical map were masked with RepeatMasker v 3.2.7 [28], using a custom database which integrates repeats from Repbase [29] and plant repeat databases [30] and RetrOryza [31].
Resulting t-maps were masked with the EC ROI and significant clusters determined by cluster-extent based thresholding (Z > 2.3; pcluster < 0.05).
The output map was masked based on the actual forest distribution as defined by the CORINE Land Cover database.
It shows that the region with high number of reads mapped is masked as repeat.
The map density covering one monomer in each map was masked out and overlapped to the other according to the noncrystallographic 2-fold symmetry (Breyton et al., 2002) by MAPROT.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com