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Maps were aligned to the human reference by OPTIMA, a new glocal alignment method.
For each region of interest, optical contigs or in silico maps were aligned to the W05 reference in silico map with OMBlast46.
Marker and/or flanking sequences for all maps were aligned as query sequences to the Supernova 10x assembly using GMap v09-14-2016 with default settings19.
The ICX neurons responded much more strongly to the light than they had when the maps were aligned.
The DH and the RI maps were aligned based on a common set of 135 SSR markers (Supplemental Fig. 1).
The individual filament maps were aligned in real space, normalized, and averaged [42], [43].
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Instructions First — create the puzzle by downloading the 2-page PDF (click here) and printing on both sides of a single sheet of paper so that the maps are aligned.
These two maps are aligned so that a particular region of the visual field is represented directly above the neurons that orient the highest acuity area of the retina toward that region.
In the latter, two maps are aligned together to figure out regions of common and individual evolution histories.
(f) The ILSCm and LA example neuron activity (top; scaled by the hot colour map) were aligned with the FS with time (the bottom red bars represent the freezing state).
The resulting F-maps were aligned to the anatomical images and then registered in stereotactic space using AFNI software [ 11].
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com