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The corresponding network maps and gene lists are depicted in the Additional file 2 and Additional file 3.
Phylogenetic comparison of bacteriophages requires whole genome approaches such as dotplot analysis, genome pairwise maps, and gene content analysis.
In this study, we used whole genome enhancer maps and gene expression profiles to establish a large panel of tele-enhancers.
Thus, comparative mapping studies between conifer species call for further developments of gene maps and gene sequence collections, but also for genomics and bioinformatics tools enabling to assess more efficiently orthology relationships.
Furthermore, we also found a correlation between the transcriptome maps and gene density, GC content, gene length, average intron length, "minimal intron" density, and recombination rate in the chicken genome.
For mycobacteriophage cluster and subcluster assignment, whole genomes are currently compared primarily by dotplot, but pairwise average nucleotide identities (ANI), pairwise genome maps, and gene content analysis are all considered [ 7].
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CGWR is an online database offering a comprehensive visual and functional genomic analysis of the chickpea genome, along with customized maps and gene-clustering options.
Backcrossing was combined with three types of selection (for total merit index) among the crossbred individuals: classical selection, genomic selection using genome-wide dense marker maps, and gene-assisted genomic selection.
SSR markers are useful in pepper linkage mapping and gene location.
By combining mapping and gene expression profiling, we narrowed down to a candidate gene responsible for the mutation.
These include evolutionary biology and population genetics inquiries, QTL mapping and gene discovery, allele mining and germplasm management, and pre-breeding and variety development, among others.
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