Sentence examples for mappings to human from inspiring English sources
Gene Ontology terms and their mappings to human genes for human genes were downloaded from National Center for Biotechnology Information at (ftp://ftp.ncbi.nlm.nih.gov/gene/DATA/gene2go.gz) on December 11 , 2009
Although we looked only at data from a single source, macrophages in various states of activation, around 54% of highly confident human promoter mappings to the pig genome were supported by complementary evidence from pig CAGE (incl. uniquely mapped singletons) and/or pig RNA-Seq data (at most 2 Kb away), of which 25% were supported by both pig CAGE and RNA-Seq data.
The remaining 87 clones were then mapped to the human genome using the Ensembl database, with all mappings verified using the UCSC Human Genome Browser (hg17 – May 2004) [ 19] and GenBank databases.
Only TFBS that could be unambiguously mapped to the human genome sequence (1,810 out of 2,521) were taken for further analysis, and these TFBS mappings were transferred to the current human genome build (NCBI Build 36 or hg18) using the UCSC Genome Browser [ 36] 'liftover' utility.
After these conjectures are verified, the successful mappings are stored as persistent mappings to constrain future analogies between the domains.
We compared these complete transcript library mappings to mappings to reference mRNA mappings for each gene, to calculate whether the mapped expressed sequence is part of an AS-NMD candidate.
Genome mappings were accepted for the BACs if they were no longer than 500 kb in length, and mappings to ambiguous chromosomes were rejected.
BED files for the FANTOM5 human/mouse mappings to the pig genome are also available as Additional file 11: Table S7 and Additional file 12: Table S8 respectively.
This makes such mappings less useful than mappings to, say, clinical diagnoses.
We found some atom mappings to be incorrect.
The correct mappings column provides the number of correct mappings in the alignment, whereas the ratio column provides the ratio of the number of correct mappings to the total number of mappings produced by the alignment.
