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We also compared the positions of the mapped reads among all reference sequences, to see if mappings to different reference sequences were consistent (see Additional file 2: Table S2).
Contigs 35 and 97 each had 4 mappings to different pathways under a different metabolism category, which was the highest number for a single sequence.
As we require EFO to be cross-referenced to as many external functional genomics datasets as possible, we maximize interoperability and therefore add as many mappings to different ontologies as are valid for our given class and curate these.
The reason that we can obtain mappings to different locations when aligning surrounding sequence to the reference genome may be due to the inherent bias in the mapping tools or gaps in the assembly of the NA12878 genome compared to the reference genome.
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In this paper we will show that the sum of two mappings belonging to different contractive classes gives one map in another class that should be different from the two classes of mappings initially considered.
As a result more than 25 K Reactome instances were mapped to a set of nearly 1 K Kegg compounds (many-to-one mappings due to different semantic scope of the original concepts).
Growth rate is derived from genotype using several different mappings to test model behaviour in different scenarios.
However, some equilibrium problems and fixed point problems of nonlinear mappings always belong to different subsets of spaces in general.
Such one-to-many mappings possibly correspond to different optical conformations of the same metabolite.
This approach is invariable to different bit-to-symbol mappings, as only symbol-to-symbol channels are considered.
It is, for example, possible to apply a mapping function several times to the same mappings using different parameter sets, in order to compare the resulting mappings.
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