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By incorporating the Runge Kutta fourth order algorithm within the likelihood-based context of functional mapping, we estimated the genetic parameters that define the periodic pattern of QTL effects on time-varying mRNA and protein abundances and their dynamic association as well as the linkage disequilibrium of the QTL and a marker.
Since this is a single-marker regression QTL mapping, we estimated the physical interval size of a QTL based on most of the original drought QTLs to be around a 1-MB region.
Before genome-wide association mapping, we estimated line means for each nutritional index using abundance of metabolite per mg of fly.
For the QTL mapping, we estimated the least-squares means of each plant trait using a mixed-model ANOVA (PROC MIXED, SAS v.9.2), which included block, plant set, and line as fixed effects.
To understand the impact of transposable elements on GBS tag mapping, we estimated the mean frequency of PA markers that perfectly match the chromosome 3B contigs and map genetically either to chromosome 3B or other chromosomes.
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Based on our mapping, we estimate that the total bulk sediment volume of self-sealing strata is 63 million cubic kilometers, 0.8-1.4 0.8-1.4 ∼1.3-2.7%) of which are sands with intrinsic permeability suitable for storing CO2.
Based on synteny mapping, we estimate that the gap between CH35-319B4 and CH35-373N1 (two two "leftmost" BACs) is approximately 3.5 kb, a region not predicted to contain V1R-like sequence.
Using Birth Date Selection Mapping, we estimate the time-dependency of allele frequency for 44,817 SNP loci using genomic best linear unbiased prediction, generalized least squares, and BayesCπ analyses.
Comparing the data from these two MAPs, we estimated the relative ratio of the 1st / 2nd positive bands of N2.
Using the data from our high-density linkage map, we estimated an average number of 1.8 chiasmata per chromosome per meiosis for Nasonia.
From the mapping coordinates retrieved from the NCBI STS map we estimated the deletion to have an extent of approximately 9.2 to 14.4 Mbp (7p13 14.3).
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