Sentence examples for mapping the contigs from inspiring English sources

The ISRpe1 transposons are too similar to one another to be assembled from 454 traces and mapping the contigs to the R. rickettsii genome followed by PCR across the gaps yielded artifactual results, again due to the similarity between individual transposons and their interaction during PCR.

Mapping the contigs on a closely related genome provides this kind of information.

Mapping the contigs to the repeat library gave 40,559,402 BLAST hits with identity higher than 78%.

The blastx hits were used for mapping the contigs and subsequently assigning gene ontology (GO) annotations using blast2go pro.

The reference order was devised by mapping the contigs onto their corresponding finished genome and placing each contig on that region where it gained the most matches.

SNPs, insertions and deletions were detected by mapping the contigs to the previously sequenced and annotated B. pertussis Tohama I genome [ 6] using BLAST.

We mapped the contigs assembled by Santure et al. (2011) to the seven bird species for which a reference genome is available (see Materials and Methods).

They mapped the contig to the 3′UTR of MECP2, and further investigation revealed that alternative polyadenylation (poly A) signals could originate transcripts of multiple lengths.

We assessed the quality of the clustering procedure by mapping the Illumina contigs to the closest NCBI genome sequences (using BLASTN [ 37], identity threshold > =90%).

We then mapped the assembled contigs in silico to the reference genome sequence of zebrafish chromosome 1.

We used efficient local alignment to quickly and accurately map the assembled contigs to the input source genomes.