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The anatomical image was co-registered to the mean functional image using the mutual information criteria method and segmented and normalized to the International Consortium for Brain Mapping template using linear and non-linear deformations [30], [31].
The reference CDS of Aedes aegypti were used as mapping template.
This step involved registration of the 67 images to the International Consortium of Brain Mapping template (Montreal Neurological Institute, Montreal, Canada), which approximates Talairach Space.
In this new segmentation process, default parameters were used, except that affine regularization was performed with the International Consortium for Brain Mapping template for East Asian brains.
In most cases the semantics of a given data source are not (yet) described in machine readable form and the initial mapping template needs to be generated manually.
In order to reduce the potential artifacts from reads cross-mapping caused by paralogs, a minimal reference coding sequences (m-CDS) of A. thaliana was used as mapping template (see Methods).
Segmentations were produced with rigid alignment to standard space (the international consortium for brain mapping template) and resampled to 1.5-mm isotropic voxels for use with Diffeomorphic Anatomical Registration Through Exponentiated Lie algebra (DARTEL) [44].
These assemblies have imperfections like all assemblies, but we feel they are of sufficient quality for gene discovery as well as providing a mapping template for re-sequencing applications.
We inversely transformed the JHU-MNI-SS atlas, which was created by linearly normalizing a single-subject DTI to the ICBM-152 (International Consortium of Brain Mapping) template, to match individual brain images.
Template for mapping Print the mapping template.
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CEO of Professional Science Editing for Scientists @ prosciediting.com