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A high mapping rate indicated that our established assembly was assembly.
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In An. gambiae, the first major study to estimate recombination rate indicated a small recombination map length of 215 cM over the 278 Mb genome, or 0.78 cM/Mb [ 1].
A low coverage rate indicated that few query reads were mapped to a segment in a reference genome; in such cases, that segment was likely absent in the query genome.
This rate indicates population stability.
What does the exchange rate indicate when selling currency?
B. Standardized response rate indicating perceived velocity.
The high percentage of transcripts that hit to known proteins, combined with the high mapping rate to the reference genome, indicated the high quality of the de novo assembled transcripts.> -wrap-foot> BH, V. pseudoreticulata accession "Baihe-13-1"; HN, V. pseudoreticulata accession "Hunan-1"; S, V. quinquangularis accession "Shang-24".
The Aligned denotes the percent of aligned reads over total reads and indicates the overall mapping rate.
Mapping quality was assessed using RSeQC and RNA-SeQC [ 33, 34], which indicated an average read mapping rate of 95.4%% (Additional file 2c), with 92.7 % of reads mapped to intragenic sequences (Additional file 2d) and an average coverage per base of 9.84 reads (Additional file 2e).
These figures indicate an improvement of the mapping rate by 1.09%% which is approximately the same as that of the observed values from our 12 samples.
bUnique Mapping Rate = Unique Mapped Reads Count/Total Reads.
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