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Mapping positions of the other TERRA-containing markers were ambiguous.
Sites of medium-sized insertions can be detected by analyzing mapping positions of paired reads.
The classification method produces a scoring of all possible mapping positions of the gene in the KEGG hierarchy.
To do so, we identified the perfect mapping positions of the most abundant piRNA sequences within the peak regions (see Methods for detail).
Mapping of eQTL to the gene itself indicates that cis changes are responsible for the different expression levels, whereas mapping positions of eQTL different from the position of the corresponding genes indicate trans regulation.
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Therefore, these data indicate that both the graphical genotypes and the mapping position of loci were adequate.
The physical mapping position of these SNPs determined in this study allows the selection of unlinked SNPs for these future applications.
Linkage map positions of these EST-SSR were compared by homology search with mapped rice genomic sequences on the basis of pearl millet-rice synteny.
The map positions of the QTLs are shown in Fig. 3b.
The amplified DNA sequences were hybridized to polytene chromosomes and the map positions of the hybridizing sites were determined.
We used the map positions of the PERO markers and other Prx-based markers to assess the number of observed clusters in our data.
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