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Large mapping populations are being used to study the genetics of a range of viticultural and resistance traits.
However, in recent studies for diploid genome systems in plants, where genome duplication and polyploidy are prevalent, whole genomic samples from large mapping populations are sequenced for complex traits association studies.
The commonality is that all the individuals in the mapping populations are inbred lines.
Details of these additional DH and RIL mapping populations are reported in Table 1.
The characteristics of the phenotyping experiments and mapping populations are reported in Additional file 6.
The genomes of individuals in QTL mapping populations are random mosaics of the founders' genomes.
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Three bi-parental mapping populations were used to develop the genetic map for organizing scaffolds into pseudomolecules.
The genotypic data for the two mapping populations were downloaded from http://ricediversity.org/data.org/data
The main limitation with QTL detection in these mapping populations is the large size of the confidence interval.
The parental lines of two mapping populations were exposed to a pulse stress of 1,000 mg L−1 Fe2+ in hydroponics.
Two mapping populations were used for linkage mapping in this study.
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