Sentence examples for mapping panel used from inspiring English sources

These lines form a diversity association mapping panel used in a number of studies [7], [16] [17].

Primers were designed for 218 microsatellites, among which 63 within 63 BAC clones were informative in the mapping panel used for linkage mapping.

Interestingly, the recombinant inbred line (RIL) mapping panel used in the present study revealed high rates of SDRs with both framework SSRs and gene-based SNP and CISP markers.

All primers were optimized using BW and PO DNA from animals unrelated to the mapping panel using touchdown (TD) protocols (either TD65, TD60, or TD55) [ 35].

In this study, we assembled a GWA mapping panel using elite subtropical maize genotypes and phenotyped it under water stress (WS) at flowering time at multiple locations to identify the SNPs associated with key agronomic traits.

To validate a subset of the RAD-Seq-derived SNPs and to compare genotype calls with a more established genotyping technology, a subset of 47 SNPs were genotyped across the mapping panel using KASP technology (LGC Genomics, Herts, UK) (Additional file 3).

Descriptions and characteristics of the two rainbow trout mapping panels, and two Atlantic salmon mapping panels used for the comparative studies have previously been provided [ 23].

The maize NCED and ZEP genes were then mapped on the LHRF or IBM mapping panels using the LHRF_Gnp2004 or REFMAP050110 (IBM_Gnp2004) framework map, respectively [ 50].

Applications of the CASCAD database include queries for potentially deleterious SNPs in a specific genomic region of interest, for example a QTL interval, design of SNP-based mapping panels using either RFLP or any other technology, and identification of informative SNPs for fine-mapping.

In 2005, a subset of 115 inbred genotypes from the full association mapping panel were used as seed parents in crosses with both B73 and Mo17.

The quality genomic DNA of the gametophyte clones of mapping panel was used for RAD sequencing.