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With the development of microsatellite markers from crape myrtle, there will be more SSRs available for use in studies such as the construction of linkage maps, mapping of useful genes, marker-assisted breeding, and evaluation of genetic diversity.
Therefore, in view of quick mapping of useful QTL for complex traits, high-density markers combined with larger population size, and QTL-seq method in early-generation populations are good options for improving the traditional mapping approach.
These desirable characteristics of microsatellite markers had made them advantageous in various applications of structural, functional and comparative genomics, including variety identification, studying genetic diversity and phylogenetic relationships, construction of high-density genome maps, mapping of useful genes, comparative genome mapping and marker-assisted selection.
As a result of these characteristics, microsatellites have become the most favoured genetic markers for plant breeding and genetics applications such as, assessment of genetic diversity, constructing framework genetic maps, mapping of useful genes, marker aided selection and comparative mapping studies [ 2, 3].
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It would be thus useful for rapid targeted mapping of genes/QTLs for useful traits, mapping the whole genome and sequencing of gene rich regions of the genome and eventually for comparative genome mapping across legumes.
The recent sequencing of the barley genome greatly facilitates the mapping and utilization of useful genetic variation [ 23].
During the early days of Optical Mapping useful map data was obtained using completely manual methods for detecting and sizing the fragments.
Recently, a number of useful maps have become available, however these maps have few common markers, and were constructed using different marker sets, thus, making integration and comparative analysis among maps difficult.
Depending on the situation and purpose of Contribution Mapping, a useful division of tasks and responsibilities has to be decided on.
The covers, in fact, fold out and harbor a variety of useful maps.
Establishment of integrated physical and genetic maps for switchgrass will accelerate mapping of value added traits useful to breeding programs and to isolate important target genes using map based cloning.
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