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The procedure of mapping of sequenced transcriptome fragments on to the reference sequence allows a defined number of mismatches [ 38].
Mapping of sequenced reads showed over 50% of all amplifiable annotated genes were well represented (roughly 14,000 transcripts).
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Mapping of sequencing data showed that 64%to96%6% of mapped TCRV-containing reads belong to TRB subtype.
Initially, NGSmirPlant performed the mapping of sequence tags mapping to the reference genome or EST using SOAP 2.0 (http://miRExpress.mbc.nctu.edu.tw).mbc.nctu.edu.tw
We include protocols for RNA isolation from Saccharomyces cerevisiae, Pseudo-seq library preparation, and data analysis, including descriptions of processing and mapping of sequencing reads, computational identification of sites of pseudouridylation, and assignment of sites to specific pseudouridine synthases.
Subsequent studies by Grabau, Barrell, Wheeler, Ager, Dott, Sadler, and others have helped to clarify the issue of missing time in the rock record, and unconformities now play a key role in the definition and mapping of sequences.
Obviously, ( e i ) i ∈ Z Open image in new window is a cochain mapping of sequence (L·,d for d i e i =ei + 1d i modulo trace class operators.
Mapping of sequence reads from pooled data is a challenging task.
The accurate genome wide estimate of allele frequencies depends also on a highly accurate mapping of sequence reads.
Direct mapping of sequence reads from FSC043 on the genome sequences of FSC198 and SCHU S4 showed an average coverage of 107× separated by highly repetitive regions.
Following mapping of sequence tags to the reference bovine genome we analyzed small RNA sequences originating from known bovine miRNA loci listed in miRBase 13.0.
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