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Spectral mapping methods, including spectral angle mapper, linear spectral unmixing, matched filtering and mixture tuned matched filtering were applied to differentiate hydrothermal alteration zones associated with porphyry copper mineralization such as phyllic, argillic and propylitic mineral assemblages.
Disease gene mapping methods, including linkage, haplotyping and association studies, identify candidate regions containing a disease susceptibility gene by exploiting the cosegregation of the disease phenotype and markers in cases as well as the difference of allele sharing between cases and controls.
Knowledge of the haplotypes is required to apply haplotype-based mapping methods including the one described here.
© 2011 Wiley Periodicals, Inc.35:853-860, 2011 The haplotype phase, the co-occurrence of alleles on a chromosome, is a vital piece of information underlying many powerful gene mapping methods including haplotype association, linkage, and genotype imputation [de Bakker et al., 2005].
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Mapping methods include paired-end mapping (PEM) [ 20], split-read mapping (SR) [ 21] and read depth analysis (RD) [ 22].
There are a variety of structured association mapping methods available including others that consider gene networks, such as TreeLasso [ 40], in addition to other methods that consider population structure [ 41] or known information about the genome [ 42].
The results of RNA-seq were analyzed by a series of bioinformatic methods including mapping, gene differential expression analysis, gene ontology (GO) and pathway analysis.
Bambus requires users to provide linking information between contigs generated from various methods including mapping of contigs to a related genome.
This document is a description of additional methods including mapping of bacterial carrier DNA, genomic annotation of peaks/mapped reads, promoter coverage correlation with gene expression and conservation analysis.
A set of participatory methods, including farm mapping, landscape level transect walks and biographical analysis of people and places, is discussed.
Data were collected through multiple methods, including behavior mapping of student activities during recess, physical assessments of schoolyards, and interviews with students, teachers and administrations.
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