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The high mapping efficiency supports the TMS approach and highlights the requirement of a long-read library for reliable mapping and annotation.
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The hairpin recovery technique improves mapping efficiency, and sequence entropy relates to mapping efficiency.
The improved index increased mapping efficiency of A-genome reads to the D-genome reference sequence.
The low quality sequence at the end of the reads can cause misalignment events and reduce mapping efficiency.
Identified Technologies claims it is improving drone mapping efficiency by 75%, allowing companies to acquire data faster.
The effect of indels on the mapping efficiency strongly depends on the mapping software.
In this report we compare the mapping efficiency of reads of different length.
As expected we obtained a decrease in mapping efficiency (Figure 7).
Already the insertion of a single base dramatically lowered the mapping efficiency of BLAT (from 97% to 67%).
This improves the overall mapping efficiency.
Our overall mapping efficiency is similar to comparable studies, which report 23.7% mean gross mapping efficiency and 42.7% mean net mapping efficiency (Meyer et al. 2011).
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