Sentence examples for mapping depth of from inspiring English sources

As mentioned above, we achieved the final effective mapping depth of > 54.6× coverage.

The average mapping depth of the sequencing data was approximately 14-fold, which is sufficient for accurate VB-based analysis.

In total, 98.3% of the reference genome sequence was covered with an average mapping depth of ~45.6-fold (Table  1, Additional files 1, 2 and 3).

The mapping depth of coverage in the Black Angus and Holstein were 9.8-fold and 10.8-fold, respectively, slightly lower than that in a previous report [ 8].

Only SNPs with a minimum mapping depth of ten, two alleles and at least two occurrences of the rarer allele were considered.

For this study, 60 individuals per species were sequenced at a mean mapping depth of 9.9 nucleotides per position for C. piger and 9.5 for C. riparius across all loci.

In the previous application of AGSNP for SNP discovery in an inbred line of Aegilops tauschii, SNPs located in repeated sequences and those due to mapping errors were removed using the average read mapping depth (RMD) (X ¯ ) and standard deviation (s) estimated from the fitted extreme value distribution of mapping depths of all mapped sequences used in SNP discovery.

Three different methods were used to analyze the sequences: split-read mapping, paired-end mapping, and depth of coverage.

Current methods for detecting structural variation from massively parallel data use either paired-end mapping or depth of coverage methods (see [ 4] for a recent review).

These heterozygous SNPs exhibit high local mapping scores, depth of coverage, Phred, consistent surrounding sequence, and are without evidence of "pile-up," local read duplication, homologues elsewhere in the genome, and so forth.

From the depth map, the depth of the feature points can be extracted by adopting a registration technique for the camera combination.