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Regions of a reference genome onto which few or no reads are mapped were deduced to be absent in the query genome.
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for all x, y ∈ C. It is not hard to know that a nonspreading mapping is deduced from a firmly nonexpansive mapping; see [7, 8] and a firmly nonexpansive mapping is a nonexpansive mapping.
The genetic map was deduced from the physical positions of the SNPs and from the genetic consensus reference map published by Groenen et al. [ 26].
For the latter, the position of the centromere on the map is deduced from the retention frequency values along the chromosome, which are usually higher near the centromere [ 35- 37].
The haplotypes of the mapping parents were deduced at every linkage group using a custom-made VBA program.
Chromosomal assignment and position on the physical map of candidate genes, GBS markers, were deduced from the watermelon Whole Genome Sequence (WGS) draft at http://www.icugi.org.
QTL intervals were deduced from centiMorgan map distances between SNP markers flanking QTL peaks of a given PHS resistance trait (GI, SI or FN).
Chromosomal assignment and position on the physical map of candidate genes, GBS markers, were deduced by using the draft whole-genome sequence for watermelon (www.icugi.org).
Between eggplant and tomato, 16,573 pairs of genes were deduced to be orthologous, and 9,489 eggplant scaffolds could be mapped onto the tomato genome.
Pericentromeric boundaries were deduced by comparing the SNP-based D84 and DRH genetic maps of Felcher et al. (2012) to the current version of PMs.
Their structures were deduced spectroscopically.
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