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Reads mapped in close proximity to the DpnII restriction sites (5 bp), reads mapped on the same fragment, and possible PCR duplicates were eliminated.
Maximum landslide locations were mapped in close proximity of the roads and the local drainages.
We found that three human retinal disease loci were mapped in close proximity to the markedly down-regulated genes in the Otx2 CKO retina.
Furthermore, we identified three human retinal disease loci mapped in close proximity to certain down-regulated genes in the Otx2 CKO retina including Ccdc126, Tnfsf13 and Pitpnm1, suggesting that these genes are possibly responsible for these diseases.
Moreover, numerous candidate branching genes mapped in close proximity to significant branching associations.
We also identified candidate genes involved in hormonal or transcriptional regulation that mapped in close proximity to significant associations.
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Positively selected sites 521, 528 and 538 also map in close proximity to natural variants, 526 and 531 respectively.
MAGEC2 belongs to the MAGE-family of CTAs, the gene shows significant homology with the MAGEC1 gene and both genes map in close proximity to chromosome Xq27.13.
Many of the confirmed GWAS disease markers map in close proximity to or within genes controlling immune response signaling pathways (PTPN22, TNFAIP3, TRAF1, CD40, and REL), transcriptional activation (STAT4 and IRF5), and cytokine production (IL-12 and IL-23) [ 26, 27].
In cases in which open reading frames mapped in very close proximity to each other (<700 bp), the query sequence spanned both genes and the intergenic region.
For the adjusted GR00-43, two QTL were mapped in very close proximity on OAR4 (108 cM and 112 cM) in repulsion phase.
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