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We also mapped a phenotypic locus for flower-type.
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However, in 2003 (Bochner, 2003), I proposed the need for a second map, a phenotypic map, that would also be annotated in concert with genomic maps.
Genetic mapping, dissecting a phenotypic trait to its underlying quantitative trait loci (QTLs) through the use of molecular markers, has proven powerful for establishing genotype-phenotype relationships and predicting phenotypes of individual organisms based on their QTL genotypes responsible for the trait [ 2].
In total 207 QTL were mapped (Table 3, Additional file 2) with an average of 5.6 QTL mapped per phenotypic trait and 9.4 QTL per linkage group (LG).
In such a model, expected genetic relatedness is mapped to phenotypic relatedness.
We mapped five phenotypic QTLs and 1465 expression QTLs.
Question marks refer to mutations that were not mapped by phenotypic markers.
Bacterial genotypes h are mapped to phenotypic traits for resistance ĥ and growth rate δ.
We then built phylogenetic profiles [ 18] for each S. meliloti protein and mapped the phenotypic data on top of the phylogenetic profiles yielding what we term 'phenotypic profiles'.
This information is essential to find candidate genes to be mapped, and their positions compared to that of major genes or quantitative trait loci of interest mapped using phenotypic data.
The GPC-B1 gene was mapped using the phenotypic information previously published for the RSLs [ 5, 14] within a 0.4 cM interval defined by flanking loci Ta S37941845 and Ta S17984935 (Table 4, Figure 5).
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