maps the strings of text to UMLS Unified Medical Language Systemm) concepts.
A class of papers (see e.g. Brodzik, 2007; Buchner and Janjarasjitt, 2003; Gupta et al., 2007; Sharma et al., 2004) tackle the problem of finding TRs as a problem in signal processing theory and usually map the input string into a time-signal in a suitable numerical domain for which several spectral techniques can be used, such as the Periodicity Transform or the Fourier Transform.
Thus the elements 'spectrum type = "NMR"' and 'reaction type = "reversible"' actually use different attribute types (spectrumType and reactionType), and it was for lexical convenience that both of these mapped onto the string 'type'type
The full form terms are then mapped using the string matching method.
There were 136 early stage biomarkers and 230 late stage biomarkers that could be mapped onto the STRING network.
These positively or negatively coexpression gene pairs from the three datasets are combined together and are mapped to the STRING [ 16] network.
A total of 14,056 annotated proteins are mapped on the STRING interactome and a total of 12,621 out of 12,785 GO BP terms are represented in the STRING network.
To construct a protein interaction map, we used the STRING 8.2 software (http://string-db.org/) which predicts protein-protein interactions, including both physical and functional interactions [45].
Then, we combine all gene pairs selected from the three datasets and map them to the STRING network [ 16], a functional association network.
Highly random-seeming sequences should uniquely map while non-random sequences, for example, a sequence with mostly Ts, will map ambiguously or be discarded since the string of Ts could map to many portions of the genome that have Cs at indeterminate locations in the string of Ts.
