Sentence examples for map the short from inspiring English sources
These datasets are normalized by using miRAnalyzer [ 27], which adopts a fast, short read alignment algorithm Bowtie [ 28] to map the short reads to mature miRNA sequences, and counts the number of mapped reads for each miRNA.
Because the interested reader is forced to go to the URL shortener to map the short URL to the real one, whoever owns the shortener sees the engagement between the audience and the content, no matter where it happens.
The PoolHap pipeline assumes that the investigators have sequenced a pool of samples and have run a mapping tool (e.g. BWA[11]) to map the short reads to a reference genome to call SNPs from the consensus sequence.
The Applied Biosystems Whole Transcriptome Analysis Pipeline was used to map the short reads.
The whole chloroplast sequence for Oryza sativa japonica (cultivar Nipponbare) was used as a reference to map the short reads.
The TopHat software [ 46] was employed to map the short reads onto the human genome (hg19) and the computationally identified exon-exon junctions.
While GPS units typically map the shortest path between two locations, researchers at Yahoo have developed a way to find the most "beautiful" route.
Three algorithms were used to analyze the properties of the networks: (1) the direct interaction algorithm to map direct gene-gene interactions; (2) the shortest path algorithm to map the shortest path for interaction between differentially expressed genes; and (3) the analyze algorithm to deduce top scoring processes that are regulated by differentially expressed genes [ 19].
The expanded stability is usually obtained by mapping the short recursion relation of the explicit Runge Kutta scheme to the recursion relation of some well-known, stable polynomial.
We mapped the short reads to the Nipponbare genome using SOAP for each accession separately [ 20].
To detect the differentially expressed genes, we first mapped the short reads to the reference genes using the Burrows-Wheeler alignment tool (BWA) program [ 51] with default parameters.
