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Whole genome genetic map size of chicken was 72.5 cM larger than the whole genome genetic map size of turkey.
Therefore, the estimated corrected map size of the sex-averaged map was approximately 2550 cM.
The largest chromosome, MGA1, had a map with 81 SNPs and a map size of 325.8 cM, followed by MGA2 with 55 SNPs and a map size of 229 cM.
The total physical map size of turkey covered by markers genotyped in this study was 939.4 Mb.
Of note, however, is the skewed corrected map size of LG17 at only 16.8 cM, likely reflecting the severe shortage of recombination events observed in this linkage group.
The number of the function-known NcCOG categories is 2835, and the map size of a BLSOM was chosen so as to provide a mean ca. 8 data points per lattice point on the BLSOM.
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We assumed complete crossover interference and map sizes of 50 cM.
To correct the chromosome ends (telomeric regions), the estimated total map size was calculated by adding 2x, where x is the average space between adjacent markers, to all map sizes of each linkage group (Fishman et al. 2001).
Although the sizes of the new interspecific and intraspecific maps are lower than expected, they both fall well within the range of previous map sizes of published interspecific maps 3380 to 5115 cM (Yu et al. 2012; Blenda et al. 2012; Shi et al. 2014) and within the range of 2061 to 4448 cM for reported intraspecific maps (Zhang et al. 2012; Gore et al. 2014; Rong et al. 2004; Tang et al. 2014).
Offline map size is limited to maps of 50 km x 50 km.
The details of the parents used in developing the mapping population, size of the mapping population, markers used, and yield QTL identified are given in Table 1.
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