Sentence examples for map quality of from inspiring English sources

The map quality of specific regions was dramatically improved by focused classification and refinement (Fig. S5 and Table S3).

This greatly limited the resolution of the overall cryo-EM density map and deteriorated local map quality of the peripheral SUR1 ABC transporter module.

For instance, Gallo et al. [30] propose a QoE ontology used by an agent-based platform to map quality of service to experience in conventional and active networks.

Differently from our approach, the QoE ontology proposed by [4] specifies the vocabulary and communication messages of the agents composing the proposed platform to map quality of service to experience.

To improve the local map quality of SUR1 ABC transporter module (maSUR1 214-1579), alignment parameters of each SUR1 ABC transporter module particles were obtained from global refined particles by symmetry expansion using relion_particle_symmetry_expand sym C4 (Zhou et al., 2015).

Specifically, MAQ's minimal map quality for the read, minimal consensus quality and minimal map quality of the best mapping read for each predicted SNP position were used as criteria to select reliable SNPs by setting the thresholds for all three parameters at 10 (SNPs with any values<10 were discarded).

To get RNA-seq quality metrics, bedtools utility (http://bedtools.readthedocs.org) was used to overlap TopHat2 mappings with mapping quality of at least 20 and defined exons and introns with a minimum overlap fraction of.8.

The probabilistic realignment model of Dindel takes into account base qualities, map qualities of reads, insert size distribution and position-dependent rates of InDel error based on homopolymer run length.

Only uniquely-mapped reads were retained for subsequent analyses (mapping quality of at least 20 and perfect matches) (Li et al. 2009).

A set of custom scripts and samtools (v 0.1.18) were used to filter reads to obtain reads that mapped uniquely, allowing up to three mismatches, minimum mapping quality of 10, minimum and maximum insert size of 150 and 1 000 000, respectively.

All reads that mapped to any of the six molecules with a mapping quality of greater than 5 were collected for each species.