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For a point x 0 ∈ X, define a sequence as follows: x n + 1 = f n + 1 ( x n ), n = 0, 1, 2, … Then the sequence O ( x 0 ) = { x n } n = 0 ∞ is said to be the orbit of x 0 under time varying map (or sequence of maps) F = { f n } n = 0 ∞.
M j) denotes the optimal match map, or sequence of matched isotopic distributions up to distribution j.
If so, this is a surprise as most centromeres are highly repetitive and heterochromatic, very difficult to map or sequence, as has been repeatedly reported by genome sequencing projects of multiple organisms [ 27, 28].
Since Ms8 and Ms9 share the same ordering in this region, this inversion either occurred in the sorghum lineage, or in the stem lineage of Miscanthus prior to the tetraploidization event, or is an error in the sorghum genetic map or sequence assembly.
An additional 16 Chr-5 tiling paths were identified through various other anchoring methods and for eleven of these the haplotype, {0} or {1}, could be indirectly inferred from the available physical map or sequence data (Additional file 1: Table S1).
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For a mapping population derived from two parents, genome-wide SNPs need to be identified between the parents prior to the SEG-Map analyses, which can be either the genome sequences already available for the parents in the rice haplotype map or sequences generated from low-coverage genome resequencing followed with missing genotype imputation.
Triticeae homoeologous group 3 aligns to rice chromosome 1, which contains the rice lax panicle and maize barrenstalk1 orthogene responsible for induction of axillary branch meristems, but this gene has not been mapped or sequenced in Triticeae.
ADARB2 is a very large gene spanning more than 500Kb in chromosome 10, but our analysis narrows the association to a region of approximately 100Kb that could be followed-up by fine mapping or sequencing for discovering functional variants and to provide a better understanding of the function of these genes in human aging.
Maps or sequences are available upon request.
Some SNPs could result from errors in mapping or sequencing.
ASFV isolates have previously been characterized by restriction enzyme site mapping or sequencing of different genome regions.
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