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The map is anchored to a dense linkage map consisting of 994 markers.
This integrated map is anchored by gene-targeted SSR markers mined from a white clover GeneThresher® (TrGT) genomic DNA sequence and from ESTs.
This new map is anchored to the tomato genetic map and previous eggplant maps, which will facilitate molecular breeding in eggplant for high CGA content and reduced browning as well as other morphological traits of importance in eggplant breeding.
This new map is anchored to the tomato genetic map as well as to four previous genetic maps of eggplant, and therefore constitutes an important tool for exploiting synteny and for molecular breeding in eggplant.
This enables the determination of a set of markers for selection and a reasonable list of candidate genes when the genetic map is anchored to the annotated genome sequence.
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Since each physical map was anchored on a linkage map, the physical maps Jr1 to Jr16 corresponded to LG1 to LG16.
Contigs containing genes relevant to this work and not tagged by the markers of the reference Vitis map were anchored by SSR markers positioned in other genetic maps [ 34], by newly developed SSR markers, and by SSCP markers [see Additional file 1].
To study the organisation of the genetic factors controlling resistance to L. maculans in relation to the duplications of B. napus genome, our integrated genetic map was anchored on the Arabidopsis genome using the homology with the SNP context sequences [ 40].
These two refined maps were anchored with 125 SSRs loci.
The linkage groups from the two microsatellite genetic maps were anchored to the physical chromosomes using fluorescent in-situ hybridization and were found to represent 52 chromosome arms [ 23, 24].
The context mapping was anchored in a desk review but allowing for informal discussions with policy partners such as Ministries of Health, institutional partners, and reflection on personal experience by the HPSR + A academics.
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