Sentence examples for map contigs with from inspiring English sources

Aligning physical map contigs with sequenced genomes has proven informative in several ways [ 87, 90].

Of the 1534 physical map contigs with at least one successfully genotyped BES marker (Table 1), 1481 physical map contigs, approximately 69.6% of physical map contigs with microsatellites, were successfully integrated with the linkage map (Table 5).

This optical map consists of 11 optical map contigs, with an average of ~98X physical coverage, each of which represents a single chromosome with clearly defined telomeric ends.

On the other hand, recombination frequencies can be calculated for physical map contigs with multiple SNP markers mapped onto the linkage map.

For a proper assessment of BAC order and for an evaluation of the effect of heterozygosity on BAC fingerprint alignments it will be necessary to compare the physical map contigs with potato sequence data.

To further confirm the anchoring results, we investigated all physical map contigs with two and more sequences anchored and assessed the distance of anchored sequences based on their order in the virtual map (GenomeZipper).

However, 54 physical map contigs, each with at least two BES markers, were mapped to multiple linkage groups based on conflicting assignments of individual BES markers, suggesting that these physical map contigs may be erroneously constructed or that they fall within duplicated regions of the genome (Table 5).

Based on these marker-associated BACs, a total of 931 physical map contigs were linked with the linkage map.

The minimum tiling path of each of the 6 physical map contigs was selected with FPC software [ 29].

Altogether, 182 (44.7%) sequences from GenomeZipper and 234 Ae. tauschii datasets were linked with physical map contigs.

This optical map was assembled from single molecule restriction maps into 14 optical map contigs, labeled as 12 chromosomes, with chromosome labels 6 and 11 both containing two optical map contigs.