So, the marker order of AL8/78-RH maps was tested by comparison with: 1) a DArT consensus genetic map [ 23]; 2) a SNP based genetic map with anchored D-genome BAC contigs [ 5]; 3) a SNP genetic map anchoring sequence scaffolds of D-genome (referred as Y2280 × AL8/78 map hereafter [ 21]); and 4) a RH map of D-genome of Chinese Spring (referred as CS RH map hereafter [ 14]).
To determine the molecular nature of the bulldog locus, we applied a positional cloning strategy using a ∼3,000 meioses F2 map cross and the microsatellite based genetic linkage map [14].
Deeper profiling of eQTLs via dense imputation with a modern 1000 Genomes based genetic map should increase eQTLs and improve fine mapping as recently demonstrated [ 79].
A fine-scale recombination map based on genetic diversity in western chimpanzees shows that the locations of hotspots in chimpanzees and humans are entirely different [ 22].
Nineteen QTLs for chalkiness were identified using a RIL population derived from the cross PA64s × 9311 based on the high-density SNP based genetic map (Gao et al. 2013).
In summary this study reports a large-scale development of SSR markers and construction of SSR based genetic map in pigeonpea for the first time.
We report here the development of a SSR based genetic map and the analysis of genome-wide segment introgressions into the background of a cultivated variety through the utilization of a synthetic amphidiploid between A. duranensis and A. ipaënsis.
Progress has been made in the development of DNA marker based genetic maps in globe artichoke [ 12- 14].
Compared to other cereals such as rice, sorghum, maize, wheat, and barley, there has been relatively little research on the development and application of molecular-markers based genetic maps in pearl millet.
In this study, an SSR based genetic linkage map of cassava was constructed using an F1 population of a cross between 'Hanatee' and 'Huay Bong 60'.
Using markers derived from a high-density AFLP-based genetic map based on an E-type × W-type cross, a phylogenetic analysis showed a clear separation between the E- and W-clades (Komatsuda et al., 2004).
