Sentence examples for map assembly and from inspiring English sources

We first used reference-based iterative map assembly and then removed the Rmaps in these assembled optical map contigs from the whole Rmap dataset, the leftover or the uncontiged Rmaps were for de novo map assembly via G & G.

TMS and SZ performed optical map assembly and analysis.

JZ worked on clone culture, data process, map assembly and drafted the manuscript.

High level of genome duplications would certainly add complexities for physical map assembly and possibly produce Q-clones.

MaM constructed the physical map with the help of NF, GP, RM, participated to the map assembly and validation and drafted the manuscript.

SZ contributed to the design of the study, carried out partial data collection, performed optical map assembly and comparison between optical map and sequence, and drafted the manuscript.

Alignment of this physical map with a genetic map of Brachypodium [15] identified long-range collinearity between the physical and genetic maps, thereby supporting the physical map assemblies and providing a useful resource for map-based gene isolation by aligning BACs with genetic markers and recombination data.

To run MAQGene we used the general parameters previously described [12] setting "max sum of error qualities for mapping assembly and pileup" to 200.

Genome mapping, assembly and finishing was performed using CLC Genomics Workbench (version 6.5.0/6.5.1) including the CLC Microbial Genome Finishing Module (version 1.2.1/1.3.0) from Qiagen.

The Genome Analysis Toolkit (GATK) was then used to generate a mapping assembly and to call SNPs for each strain.

This combines mapping, assembly, and repeat analysis, and is coupled with a self-tuning k-mer strategy for the sensitive and specific discovery of InDels in exome capture data.