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Heat map and hierarchical cluster displays differential expression profile of NCX genes across various developmental stages.

Heat map and hierarchical clustering displays differential expression profile of rice NCX genes across various developmental stages.

The highest nodes of the hierarchical clustering were represented in the factorial plane and defined the center of gravity for the genotypes in each cluster (Figure 2), Cluster 3 had positive coordinates on the first two axes opposite to Clusters 1 and 2. Figure 2 Simultaneous representations of principal component map and hierarchical genotype clustering.

A summary heat map and hierarchical clustering of gene expression patterns during the maturation of the culture is shown in Fig. 6.

Heat map and hierarchical clustering were performed by the R package "gplots" [ 24].

The mean log2-fold changes within each group were visualized as heat map and hierarchical clustering was performed using Genesis.

Neural networks (self-organizing maps) and hierarchical clustering approaches were applied to characterize litho-facies in un-cored but logged wells.

Profiling using heat maps and hierarchical clustering is a standard output of HITChip analysis [23] (Figure 7, left).

BioSunMS also provides heat maps and hierarchical clustering.

Heat mapping and hierarchical cluster analysis of the genes identified 14 different gene clusters.

It gives comprehensive knowledge for the selection of subsets of SNP markers to use from polymorphism, mapping and hierarchical information.