Sentence examples for map alignments to from inspiring English sources

Maps, by definition, do not posses the same resolution as sequence, so that map alignments to sequence reveal discordances governed by experimental factors that hinge on the average restriction fragment size, or "resolution" of the final map, which is limited by reliable detection of small restriction fragments, sizing errors, and the extent of genome coverage [ 55].

Biologically, the map alignment, compared to individual map analysis, provides clues about the timing and direction of map evolution as well as the type of operation.

contains the number of pairwise map alignments which need to be computed.

In other words, crosses involving genes that seemed to be very close to each other based on predicted map alignments were not more likely to reveal allelism than those that appeared to be somewhat further apart, reflecting once again the inherent uncertainties associated with short distances.

We examined the fraction of mapped reads from alignments to pseudogenomes, and compared it with the fraction of the same reads when mapped to the standard reference genome.

In particular, as we show in Supplementary Note 1 in Additional file 1, based on parameter estimates for optical mapping data, restricting alignments to eight missing cuts or five false cuts, consecutively, should retain high sensitivity.

Visual representation of map alignments was achieved using AutoGRAPH [ 30].

Visual representation of map alignments was achieved using cMap [ 38].

Mapping or alignment to the KH assembly [ 25] was performed as described in the Methods.

DNA segments flanking the new MiMIC insertions were amplified by inverse PCR, sequenced, and mapped by alignment to the reference genome sequence (Venken et al., 2011a).

Finally, the short sequenced fragments (known as tags) are computationally mapped by alignment to a reference genome and regions of enriched tag counts are identified, a step known as peak-calling.