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In this study we identified many novel putative regulatory relationships.
Thus, our in silico description of the c-Myc regulatory gene network has yielded already known and also many novel putative direct and indirect targets of c-Myc.
Among the numerous inferred condition-specific regulatory associations between gene sets and TFs, also many novel putative regulatory mechanisms, such as the possible role of Tye7 in sulfur metabolism, were identified.
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Among the CNEs that we identified were previously-studied regulatory elements, as well as many unidentified novel putative regulatory elements.
gambiae midgut transcriptome demonstrated that high-depth sequencing can uncover many novel intergenic transcripts, including putative lncRNAs [ 18].
Recently, epigenetic silencing of many novel genes that function as putative tumour suppressor genes has been reported to contribute to human lung cancer.
By employing greater sequencing depth, we identified many more miRNAs including conserved and novel putative miRNAs with high confidence and investigated their specific expression patterns during seed development.
Although many proteins that we identified were already known from I. scapularis and I. pacificus, several novel putative proteins were discovered.
Overall, 69 different HPV types/putative types were identified, being 17 of them novel putative types.
We identified 10 novel putative Dpp and/or Wg target genes in the developing wing.
PAS factor is a novel putative bacterial secretion factor thought to induce secretion of periplasmic proteins.
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