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Single-celled organisms have been found to be the dominant agent for genetic transfer, and many microbial eukaryotes and plant mitochondria provide rich in examples of HGT [ 7].
For prokaryotes and many microbial eukaryotes, however, this sort of comparison cannot be achieved, as no organismal tree based on morphological characters can be proposed.
However, many microbial eukaryotes have a combined nuclear ciliary structure, the "karyomastigont" (Walker et al. 2011) inter alia, and in mammalian cells nucleoporins form a complex at the base of the cilium (Kee et al. 2012), all suggesting a functional and evolutionary connection between the IFT and the NPC (Kee and Verhey 2013).
If it is true that for many microbial eukaryotes the plastid mutation rate is lower than that of the mitochondrion, it could mean that ptDNAs are a more suitable genome for wide-scale comparative analyses, such as those attempting to resolve relationships among distantly related groups or organisms (Baurain et al. 2010).
In many microbial eukaryotes the VPS25 gene was encoded by a single exon: Giardia lamblia, Trichomonas vaginalis, Leishmania sp., Trypanosoma sp., all the Saccharomycotina, some (Magnaporthe grisea, Neruospora crassa, and Phaeosphaeria nodorum) but not all Pezizomycotina, and one basidiomycete (Ustilago maydis).
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Our bioinformatic analyses also included the identification of repetitive sequences (in addition to the TpLRR) that are often linked with surface proteins important for host-pathogen interactions in many pathogenic bacteria and microbial eukaryotes and are directly implicated in virulence and pathogenicity, including adhesion to host tissues and immune evasion [ 43, 44].
The dinoflagellates are protists (i.e., microbial eukaryotes) common in many aquatic environments and are ideal organisms for investigating the impact of HGT on eukaryotic evolution.
Many protists are intimately associated with bacteria or microbial eukaryotes, which serve as food sources, pathogens, or symbionts.
These perspectives have previously been difficult to evaluate for microbial eukaryotes because extensive diversity underlies many morphospecies and most species are recalcitrant to cultivation [ 12, 13].
During the past decade an unexpectedly high diversity of microbial eukaryotes has been revealed in many aquatic habitats (Moreira & López-García, 2002; Gleason et al., 2008; Lefèvre et al., 2008; Lopez-Garcia & Moreira, 2008; Sime-Ngando et al., 2010).
Microbial eukaryotes encompass the majority of eukaryotic evolutionary and cytoskeletal diversity.
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many microbial preparations
many microbial antigens
many other eukaryotes
many microbial adhesins
many microbial studies
many microbial populations
many microbial metabolisms
many microbial systems
many unicellular eukaryotes
many microbial genomes
many microbial polysaccharides
many microbial enzymes
many microbial communities
many microbial organisms
many recent eukaryotes
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