Sentence examples for many contigs were from inspiring English sources

The contigs that showed altered expression after short term cold were predominantly up-regulated, whereas many contigs were down-regulated in the prolonged cold treatment (Figure 2).

Many contigs were from plants, presumably of dietary origin.

Many contigs were similar to silk proteins from spiders, such as fibroin, dragline, flagelliform, major ampullate spidroin and flag silks.

Furthermore, many contigs were as long as, or longer than, the corresponding Arabidopsis orthologues, indicating thorough transcript coverage for many genes.

Many contigs were similar to ubiquitin genes, and among the most strongly expressed genes, there was a tendency of lower expression in E. globulus.

Examination of the 36 801 contigs with BLAST matches to protein-coding sequences in the TAIR9 protein database indicates that many contigs were as long as their corresponding full-length orthologous Arabidopsis transcripts (Fig.  2).

The length of many contigs is smaller than 10 kb and therefore smaller than the roo/ rooA element.

Briefly, many contigs are broken apart by the assembly software due to variability that can be induced by gene duplications, splice variants or even allelic variation [ 7].

Given the comprehensive annotation of the chicken genome in particular, it also seems improbable that many contigs are as-yet unidentified genes (iv).

Yet, even for this species, the total number of contigs obtained (30,120) probably substantially overestimates the total number of genes present in the genome as many contigs are so short that many genes are represented by two or more contigs.

Since many contigs are likely to be rare, with perhaps less than 1% of expressed genes accounting for 50% of cellular mRNA [ 68], a typical RNA-seq experiment will fail to record sequence from many transcripts.