Sentence examples for many bioinformatics methods from inspiring English sources

Many bioinformatics methods have been developed for predicting new AMPs.

To address these issues, many bioinformatics methods for identifying gene-gene interactions have been proposed and one such method is multifactor dimensionality reduction (MDR) [ 2].

In recent years, many bioinformatics methods have been adapted to PPI calculations and have been categorized into four types of methods: methods based on genomic information; methods based on evolutionary relationships; methods based on protein sequences (ab initio); and methods based on protein 3-dimensional structural information.

Genome sequencing has led to the development of many bioinformatic methods for accurate recognition and extraction of promoter sequences.

Many common bioinformatic methods of today, e.g. BLAST, hidden Markov models, PSI-BLAST and Prosite scans, assume that the relative amino acid residue frequency is more or less the same for all larger protein data sets.

Logistic regression is another commonly used multivariate method that has been applied to many bioinformatics tasks for both classification and feature ranking.

Among them, there are methods for similarities calculation, which are used by many bioinformatics applications.

Although many aspects of feline-specific biology have been elucidated to date, bioinformatics methods and comparative genomics approaches can provide a mechanism for producing a number of plausible and useful biological hypotheses from feline cDNA sequences.

The support vector machine method (SVM) has been widely applied to many bioinformatics studies: protein-fold assignment [ 18, 19], subcellular localization prediction [ 20, 21], secondary-structure prediction [ 22– 24], and other biological pattern-classification problems [ 25– 28].

The proteins are easy to identify by bioinformatics methods and shown to be essential for virulence in many systems.

Skyline thus helps the analytical community avoid the fragmentation of bioinformatics methods and tools that has hampered standardization of shotgun proteomics and many genomic analyses.