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These elements are highly conserved between wallaby and opossum, but the eutherian sequences contain many alignment gaps.
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Multiple sequence alignment gaps are supported by this camb functionality.
The alignment gaps were trimmed using Gblocks [54], [55].
All alignment gaps were treated as missing data.
Positions with alignment gaps were excluded from further analyses.
Many alignment algorithms exist.
All positions with alignment gaps were excluded.
That is, fewer than 5% alignment gaps.
The multiple alignment contained 66 sites with alignment gaps.
Alignment gaps were treated as missing data.
Alignment gaps were eliminated from the analysis.
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