Sentence examples for many alignment formats from inspiring English sources

There are many alignment formats available.

Many alignment formats were supported, and feature annotation extracted from SwissProt (Boeckmann et al., 2003) flat-files could be plotted on the alignment to highlight important regions of a sequence.

Many alignment algorithms exist.

Both pairwise and multiple sequence alignments output to standard alignment formats for further processing or visualization.

HMCan accepts the most common alignment formats: SAM/BAM and BED, and outputs predicted regions in BED and WIG formats.

Many alignment methods often produce reasonable alignments which score worse than alignments with alternative templates.

Saguaro provides conversion tools for Multiple Alignment Format (MAF), Variant Call Format (VCF), and multi-FASTA format of aligned genomes.

However, for the halftone-based watermarking methods, there is no uniformly accepted alignment format so far.

The default output alignment format is SAM (Sequence Alignment/Map format).

Alignment format conversions were performed using the ALTER webserver [ 56].

Second, the data exists in a specialized format, the Multiple Alignment Format (MAF; Supplementary Fig. S1).