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After manually revising the extracted terminology, the glossary of relevant terms for CTX comprised a total of 93 UMLS concepts.
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We manually revised the set of abstracts, searching for any term describing these concepts.
We can manually revise the transformed image locally in a hierarchical multigrid manner to make the transformed image register well with the reference image.
Using the SIW tool, developers and NCI vocabulary experts manually revise the automated matches to produce a semantic annotation for each UML entity.
New evidence for requiring a change has sometimes been found even in genes with good evidence for the existing structure and it is time consuming to manually revise the status of genes under such a scoring scheme.
Because of systematic and sporadic errors in EnsEMBL gene predictions, we had to manually revise the structure of each of the 69 genes encoding proteins detected by the HMM-based search.
Because Ortho-MCL results may be susceptible to the choice of the inflation parameter, which controls the OG size, and to the accuracy of the alignments; we manually revised the alignments of all gene families and constructed phylogenetic trees to assess whether the genes in each OG could be considered true orthologs.
To solve these problems, we had to manually revise the predicted structure for all genes encoding proteins detected by the protein-level searches, and correct them using supporting evidence available in the EnsEMBL database, as well as additional evidence generated by us.
Alignments of the 13 mitochondrial proteins were performed with CLUSTAL W v1.82 [ 70] and manually revised, then the equivalent nucleotide (nt) alignments were "back-aligned" from the protein data.
Even some of the manually revised gene models in the MIPS F. graminearum database appeared to be incorrect, indicating that gene annotations in the F. graminearum database still need to be improved and that RNA-Seq analysis can significantly improve the published gene models.
The manually revised final classification (Figure S3) shows the functional classes and their percentage in the gene set.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com