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The read composition of the refined set of contigs was manually reviewed using SeqMan (DNASTAR, Madison, Wisconsin, USA).
Genotype clusters were manually reviewed using Typer 4.0 software (Sequenom), and genotype calls were corrected where necessary.
The reactions and genes in the draft model were manually reviewed using the gene annotations and the available biochemical and physiological information.
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Bibliographies of included articles were manually searched for additional articles which were then screened and reviewed using the same methods.
All traces were manually reviewed by A. S., using Integrative Genomics Viewer (Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA).
These research parameters were calculated from the manually reviewed and annotated defibrillator recordings using the software bundled with the defibrillators.
We analysed the 'general' test set using MetaMap and manually reviewed the results, classifying the extracted terms as correct or incorrect using the same criteria as for assessing FMA.
All coding mutations were manually reviewed by examination of BAM files using the Integrative Genomics Viewer.
Retention time alignment was performed using automatic settings and manually reviewed for accuracy on each sample.
Sixty charts were manually reviewed to confirm the diagnosis of RA using a rheumatologist's diagnosis as the gold standard.
After removal of personal identifiers and information on drug use, we manually reviewed the profiles of these 555 patients.
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