Sentence examples for manually refined using from inspiring English sources

Alignments were manually refined using phylogenetically conserved secondary structures.

All the alignments were edited and manually refined using the ED program from the MUST package [47].

Nucleotide sequences were aligned with Clustal W version 1.4 [39] and manually refined using MacClade v4.05 software.

Ambiguously aligned regions were automatically detected and removed using the program Gblocks [31] and this selection was manually refined using the program ED.

Clusters were manually refined using K lustaviewa software.

Alignments were manually refined using BioEdit sequence editing software [ 43].

PAT subgroup alignments were manually curated, and refined using UGENE (http://genome.unipro.ru) and Jalview [44].

The model of nsp4C was then manually built and refined using the programs O [44] and CNS [45].

The TEM8 model was further built manually with COOT [37] and refined using REFMAC [38] from the CCP4 suite [39].

The model of the N terminus (L24EVG to FIET135) of TraO/VirB9 was fitted first manually and then it was refined using the Flex-EM software (Topf et al, 2008; Pandurangan and Topf, 2012).

The model was refined using AutoBuster and manually rebuilt in COOT 0.6.2 and O 10.0.3.