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If an error is detected, the program or the model is manually modified and verified again.
It also provides facilities to depict reaction mechanisms and schemes; structures generated with mol2chemfig can be manually modified and incorporated into such schemes.
The alignment was manually modified, and positions of deletions or insertions (indels) were determined.
Where relevant, the central cytosine was also manually modified, and the results of all simulations were analysed using the X3DNA software package.
For calculation of difference maps scripts from the CCP4 program suite package were manually modified and used at each step as indicated in brackets.
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The alignments were then manually modified as required and the modelling and validation process repeated.
Dwell positions and dwell weights were manually modified after geometric and dose point optimization until dose-volume constraints were optimally matched.
They posit that the absence of the cross-validation SE prevents evaluating the validity of kriging estimation, as we implemented in this context, and the comparability of both regional-versus national-scale kriging and manually modified versus semiautomated, default-calculated semivariograms.
They were visualized and manually modified using Jalview 2.7 [ 39].
The trees were drawn by TreeView version 1.6.6 [ 45] and manually modified in a general-purpose graphics editor.
We started with the description of β-oxydation and fatty acid elongation from iIN800, projected them to Y. lipolytica, and manually modified to mirror the relevant literature.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com