Sentence examples for manually edited with from inspiring English sources

Sequence chromatograms were manually edited with Sequencher 4.5 (Gene Codes, Ann Arbor, MI).

Image spots were detected, matched, and manually edited with the Image Master-2D Platinum 6.0 software (GE Healthcare).

The generated FASTA file was edited to eliminate redundancy, and the sequences were realigned and manually edited with the ClustalW aligner available in the MEGA 4.0 program [62].

Multiple sequence alignments were realized with EBI ClustalW2 (http://www.ebi.ac.uk/Tools/clustalw2/index.html) [46] on default settings and manually edited with BioEdit [47].

Sequences were assembled and manually edited with CodonCode aligner (CodonCode Corporation, Deadham, MA, USA) and sequence alignments were created with MUSCLE using default parameters [25].

The FASTA file generated was edited for redundancy elimination, and the sequences were realigned and manually edited with the ClustalW aligner of the MEGA4.0 program [41].

Finally, an iterative mapping approach with MIRA v4.0 and manually editing with gap4 (Staden et al. 2000) were used for closing the remaining gaps (Sloan and Moran 2012b).

Each sequence was manually edited in conjunction with its chromatogram.

Two separate alignments for Basidiomycota and Ascomycota were created using MAFFT 7.110 [ 80], manually edited and curated with GBlocks allowing smaller final blocks and gap positions within it [ 81].

For these unigenes, automated ORF predictions were replaced with manually edited versions for Gene Ontology annotations.

Analysed images were manually edited for any spots with hybridization artefacts and flagged for exclusion in further analysis.