Sentence examples for manually collapsed from inspiring English sources

Manually collapsed nodes are named after the number of contained nodes, such as the white node containing 118 commits and the green node containing 24 commits in Fig. 9).

We also manually collapsed the genotypes of all split loci identified in Step 4 into a single marker genotype.

Consequently, these clusters were manually collapsed into two primary clusters in which the significantly differentially expressed elements were either reduced (repressed) or increased (induced) in response to S. aureus infection (Fig. 3).

The expanded outer shell was collapsed manually and gently over the graft.

SNP data were transformed manually, and no alleles were collapsed together.

Sequences were collapsed into haplotypes by manually removing INDELS using the multiple alignment editor program Jalview.

Sequences were aligned in MUSCLE 3.6 [ 23] and manually adjusted in Se-Al 2.0a11 [ 23] before being collapsed into haplotypes in COLLAPSE 1.2 [ 24] treating gaps as 5th state (see Additional file 4).

The VirDB was made non-redundant using CD-HIT [ 128] with default values, and then curated manually to ensure that genes from the same operon were not collapsed into a single entry.

For quantifying cell numbers expressing a marker or an area of positive cells, equal numbers of optical stacks were taken per specimen, collapsed, and quantified using Automeasure in AxioVision (Zeiss, Jena, Germany) or manually.

Each of the n = 3,880 narratives was then manually reviewed and categorised into 1 of 29 specific activity groups that were subsequently collapsed into seven broad activity groups.

When the diseases analyzed are collapsed into the eight broad disease categories, 48% (or 271 out of 567) of the manually curated relationships are captured in our analysis (p < 10-16).