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In each of the images, the calibration pattern region has to be delimited manually by drawing a polygon that encloses the area.
A unique property of the tool is the explicit availability of a two-dimensional shape space, which can be used for designing the deformation either automatically by following constraints and objectives or manually by drawing deformation paths.
Cylinders were defined manually by drawing circles around nuclei in ImageJ.
The CC area was measured manually by drawing a line at the maximal anteroposterior dimension of the CC and another line is drawn perpendicularly at its midpoint) [ 25].
The new motion-corrected series automatically replaces the original dynamic series; 2. Registration: selection of the first volume in the dynamic series as reference volume for registration; 3. Curve calculation: calculation of enhancement curves and segment structures manually by drawing regions of interest (ROIs) in the dynamic series.
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Regions of interest (ROIs) were manually defined by drawing contours around the tumor area in every diffusion-weighted image slice in which the tumor was visible.
β-cat staining was manually quantified by drawing a five-pixel thick line along the membranes measuring integrated intensity of sum-projected z-stacks.
The assistant prepared sequentially numbered opaque and sealed envelopes with cards numbered 1, 2 or 3, manually randomized by drawing these cards from a box.
For Set III, the original connection tables for test images are obtained by drawing structures manually using the ChemDraw software.
The randomization sequence was generated manually, in blocks of four, by drawing chits of paper from a bag, by a person not involved in the execution of the study or the analysis of its results.
Volume of the individual cartilage plates (medial and lateral femoral condyles, medial and lateral tibial plateaus and patellar) are manually isolated from the total volume by drawing disarticulation contours around the cartilage boundaries on each section.
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